Data Analysis Documentation

Bionano Solve™ is an analysis pipeline for Bionano data processing, optimized for Bionano and Saphyr Compute Servers. These tools perform computation jobs for the Saphyr.

Below are documents required for installing and interpreting the data that is produced via the analysis pipeline.
The Report Guidelines documents give guidance for interpreting QC Reports, while the Theory of Operation documents explain the fundamentals of any given analysis method. The File Format Specification Sheets give detailed explanations of the different files utilized or produced by the pipeline.


Data Collection - 30173, Rev E268 KB

How much data to collect for a given application.

Bionano Access Dashboard and Chip Metrics - 30304, Rev B299 KB

Interpreting the Bionano Access Dashboard view for sample quality.

Molecule Quality Report - 30223, Rev C390 KB

Interpreting the Molecule Quality Report (MQR) in Bionano access for sample quality.

De Novo Assembly Informatics Report - 30255, Rev D421 KB

Interpreting the Assembly Report from Bionano Access once the molecules have been assembled into de novo maps.

Hybrid Scaffold Report - 30324, Rev A156 KB

Interpreting the Hybrid Scaffold Report when scaffolding Bionano maps with NGS contigs.

Contact Support

Call 858.888.7663 or email us at

This website stores cookies on your computer. These cookies are used to collect information about how you interact with our website and allow us to remember you. We use this information in order to improve and customize your browsing experience and for analytics and metrics about our visitors both on this website and other media. To find out more about the cookies we use, see our Privacy Policy.