Bionano Genomics Saphyr Data Solutions
Bionano Genomics Saphyr Data Solutions

Bionano Access

Automate data analysis: monitor and manage Saphyr remotely

Bionano Access™, your web-based hub for Saphyr operations, provides all the software you need for experiment management and Bionano optical genome mapping in one place.

  • Set up runs and monitor real-time data quality metrics remotely to flag potential sample quality issues early
  • Automatically start de novo assemblies and structural variation analysis when the desired amount of data has been collected
  • Visualize and manipulate maps and structural variants
  • Analyze trios by filtering through uncommon variants to identify inherited and de novo variants, and export in a dbVar-compliant VCF file
  • Find somatic variants by comparing tumor vs matched normal samples
  • Find heterogeneous/mosaic variants down to 1% allele fraction
Bionano Genomics Saphyr Data Solutions

Bionano Compute On Demand

Reduce infrastructure costs and increase your optical genome mapping capacity

Bionano Compute On Demand is a pay-per-use solution accessible through Bionano Access web server for your Bionano Solve operations. Compute On Demand simplifies the way you perform genome assembly, hybrid scaffolding, and structural variant analysis, without the need for any additional infrastructure, giving you the flexibility and scalability your experiment deserves. Advantages include:

  • Analyze large genomes and high number of samples simultaneously
  • Perform pipeline analysis operations without worrying about server capacity
  • Data encrypted for secure operations
  • Data centers compliant with IPAA, CSA, SOC2, ITAR regulations
  • Genomic data accessible only to end-users and deleted post-processing

Bionano Compute on Demand requires Bionano Access 1.6.1 which is available on our Software Downloads page.

For more information, download the Bionano Compute On Demand brochure.

Typical Number of Compute On Demand Tokens Required

Human de Novo Assembly1CalculatedMax tokens computed based on input molecules. 2 Tbp limit (down sampled to 250x at runtime)
Non-Human or No Reference de Novo Assembly150Below 300 Gbp
Non-Human or No Reference de Novo Assembly10150300 - 500 Gbp
Non-Human or No Reference de Novo Assembly20250500 - 1000 Gbp
Non-Human or No Reference de Novo Assembly304001000 - 2000 Gbp
Non-Human or No Reference de Novo Assembly405002000 - 3000 Gbp (Limit Increased)
Non-Human or No Reference de Novo Assembly506503000 - 4000 Gbp (New Tier)
Two Enzyme Hybrid Scaffold130 
Variant Annotation (Single)13 
Variant Annotation (dual or trio)110
Bnx Merge12 
Filter Bnx12 
SV Merge15 
Rare Variant Analysis3250 - 2000 Gbp
Rare Variant Analysis5502000 - 6000 Gbp (New Tier)
Bionano Enfocus FSHD Analysis15New Operation
OperationMin TokensMax TokensNotes

*Number of tokens required dependent on the data quality and coverage

Saphyr Compute Server

Enhanced data processing power for high-speed optical genome mapping

The Saphyr Compute Server offers cluster-like performance in an affordable, compact solution. Capable of performing multiple simultaneous analyses and sustaining continuous throughput, the Saphyr Compute Server allows you to spend less time waiting for data so you can focus on investigating results.

  • Perform de novo assembly of a human genome in approximately 9 hours
  • Simple web-based interface enables integration into virtually any network setup
  • Cloud-based solutions available

Bionano Compute Server

Additional power for Saphyr

The Bionano Compute Server is a stand-alone, secondary compute server that offers the ability to perform automated genome assembly, hybrid scaffolding and structural variant calling in parallel with the Saphyr Compute Server. Additional Bionano Compute Servers can be added for increased processing power.

Bionano Genomics Saphyr Data Solutions

Bionano Data Solutions Ordering Information

  • Saphyr Compute Server: Part # 80013
  • Bionano Compute Server: Part # 80014
  • Bionano Compute On Demand, US: Part # 90047
  • Bionano Compute On Demand, Canada: Part # 90128
  • Bionano Compute On Demand, Germany: Part # 90052
  • Bionano Compute On Demand, Europe: Part # 90060

Order Compute Solutions


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